Department of Biomedical Engineering, Carnegie Mellon University
e-mail: frankyeh (at) cmu.edu
Documentation
From Source Images to Tractography
1.Read DICOM/Analyze/2dseq files Parse DICOM, analyze, or 2dseq file format, and create a .src file, which can be loaded in MATLAB.
2.Reconstruction Open .src file and perform DTI, QBI, DSI, or GQI reconstruction, and create a .fib file, which contains fiber orientations. The .fib file can also be loaded in MATLAB.
3.Fiber tracking Open .fib file and perform fiber tracking.